Index

_

__init__() (GPSat.local_experts.LocalExpertOI method) (GPSat.models.base_model.BaseGPRModel method) (GPSat.models.gpflow_models.GPflowGPRModel method) (GPSat.models.gpflow_models.GPflowSGPRModel method) (GPSat.models.gpflow_models.GPflowSVGPModel method) (GPSat.models.vff_model.GPflowVFFModel method)

A

add_cols() (GPSat.dataloader.DataLoader static method), [1] add_data_to_col() (GPSat.dataloader.DataLoader static method), [1]

array_to_dataframe() (in module GPSat.utils), [1] assign_category_col() (in module GPSat.utils), [1]

B

BaseGPRModel (class in GPSat.models.base_model) bin_data() (GPSat.bin_data.BinData method) (GPSat.dataloader.DataLoader static method), [1] (GPSat.dataprepper.DataPrep static method) bin_data_all_at_once() (GPSat.bin_data.BinData method) bin_data_by() (GPSat.dataloader.DataLoader class method), [1] (GPSat.dataprepper.DataPrep class method)

bin_data_by_batch() (GPSat.bin_data.BinData method) bin_obs_by_date() (in module GPSat.utils), [1] bin_wrapper() (GPSat.bin_data.BinData static method) BinData (class in GPSat.bin_data) BlockDiagMat (class in GPSat.vff)

C

check_prev_oi_config() (in module GPSat.utils), [1] col_funcs (GPSat.local_experts.LocalExpertData attribute) col_select (GPSat.local_experts.LocalExpertData attribute) compare_dataframes() (in module GPSat.utils), [1] config_func() (in module GPSat.utils), [1]

connect_to_hdf_store() (GPSat.dataloader.DataLoader method) convert_lon_lat_str() (in module GPSat.utils), [1] coords_col (GPSat.local_experts.LocalExpertData attribute) (GPSat.prediction_locations.PredictionLocations property) cprint() (in module GPSat.utils), [1]

D

data_select() (GPSat.dataloader.DataLoader class method), [1] data_source (GPSat.local_experts.LocalExpertData attribute) DataConfig (class in GPSat.config_dataclasses) dataframe_to_2d_array() (in module GPSat.utils), [1] dataframe_to_array() (in module GPSat.utils), [1] DataLoader (class in GPSat.dataloader), [1] DataPrep (class in GPSat.dataprepper)

date_from_datetime() (in module GPSat.datetime_utils) datetime_from_float_column() (in module GPSat.datetime_utils) datetime_from_ymd_cols() (in module GPSat.datetime_utils) DiagMat (class in GPSat.vff) dict_of_array_to_dict_of_dataframe() (in module GPSat.utils), [1] dict_of_array_to_table() (GPSat.local_experts.LocalExpertOI static method) diff_distance() (in module GPSat.utils), [1]

E

EASE2toWGS84() (in module GPSat.utils), [1] EASE2toWGS84_New() (in module GPSat.utils), [1] elbo() (GPSat.vff.GPR_kron method) engine (GPSat.local_experts.LocalExpertData attribute)

ExactGPR (class in GPSat.models.gpytorch_models) expand_dict_by_vals() (in module GPSat.utils), [1] ExperimentConfig (class in GPSat.config_dataclasses) expert_loc (GPSat.prediction_locations.PredictionLocations property) ExpertLocsConfig (class in GPSat.config_dataclasses)

F

file_suffix_engine_map (GPSat.dataloader.DataLoader attribute) (GPSat.local_experts.LocalExpertData attribute) (GPSat.local_experts.LocalExpertOI attribute)

forward() (GPSat.models.gpytorch_models.ExactGPR method) from_file_start_end_datetime_GPOD() (in module GPSat.datetime_utils) from_file_start_end_datetime_SARAL() (in module GPSat.datetime_utils)

G

generate_local_expert_locations() (GPSat.dataloader.DataLoader class method) get() (GPSat.postprocessing.SmoothingConfig method) (GPSat.vff.BlockDiagMat method) (GPSat.vff.DiagMat method) (GPSat.vff.LowRankMat method) (GPSat.vff.LowRankMatNeg method) (GPSat.vff.Rank1Mat method) (GPSat.vff.Rank1MatNeg method) get_attribute_from_table() (GPSat.dataloader.DataLoader static method), [1] get_bin_data_config() (in module GPSat.bin_data) get_col_values() (in module GPSat.utils), [1] get_config_from_sysargv() (in module GPSat.utils), [1] get_config_path() (in module GPSat) get_data_path() (in module GPSat) get_diag() (GPSat.vff.BlockDiagMat method) (GPSat.vff.DiagMat method) (GPSat.vff.LowRankMat method) (GPSat.vff.Rank1Mat method) get_dirs_to_search() (in module GPSat.read_and_store) get_git_information() (in module GPSat.utils), [1] get_inducing_chol() (GPSat.models.gpflow_models.GPflowSVGPModel method) get_inducing_mean() (GPSat.models.gpflow_models.GPflowSVGPModel method) get_inducing_points() (GPSat.models.gpflow_models.GPflowSGPRModel method) (GPSat.models.gpflow_models.GPflowSVGPModel method) get_kernel_variance() (GPSat.models.gpflow_models.GPflowGPRModel method) (GPSat.models.gpytorch_models.GPyTorchGPRModel method) (GPSat.models.pure_python_gpr.PurePythonGPR method) (GPSat.models.sklearn_models.sklearnGPRModel method) (GPSat.models.vff_model.GPflowVFFModel method) get_keys() (GPSat.dataloader.DataLoader class method) get_lengthscales() (GPSat.models.gpflow_models.GPflowGPRModel method) (GPSat.models.gpytorch_models.GPyTorchGPRModel method) (GPSat.models.gpytorch_models.GPyTorchKISSGPModel method) (GPSat.models.pure_python_gpr.PurePythonGPR method) (GPSat.models.sklearn_models.sklearnGPRModel method) (GPSat.models.vff_model.GPflowVFFModel method) get_likelihood_variance() (GPSat.models.gpflow_models.GPflowGPRModel method) (GPSat.models.gpytorch_models.GPyTorchGPRModel method) (GPSat.models.pure_python_gpr.PurePythonGPR method) (GPSat.models.sklearn_models.sklearnGPRModel method) get_loglikelihood() (GPSat.models.pure_python_gpr.PurePythonGPR method) get_masks_for_expert_loc() (GPSat.dataloader.DataLoader static method), [1] get_objective_function_value() (GPSat.models.base_model.BaseGPRModel method) (GPSat.models.gpflow_models.GPflowGPRModel method) (GPSat.models.gpflow_models.GPflowSGPRModel method) (GPSat.models.gpflow_models.GPflowSVGPModel method) (GPSat.models.gpytorch_models.GPyTorchGPRModel method) (GPSat.models.pure_python_gpr.PurePythonGPR method) (GPSat.models.sklearn_models.sklearnGPRModel method) (GPSat.models.vff_model.GPflowVFFModel method) get_parameters() (GPSat.models.base_model.BaseGPRModel method) get_parent_path() (in module GPSat) get_path() (in module GPSat) get_previous_oi_config() (in module GPSat.utils), [1] get_projection() (in module GPSat.plot_utils) get_results_from_h5file() (in module GPSat.local_experts), [1] get_run_info() (GPSat.dataloader.DataLoader static method), [1] get_smooth_params_config() (in module GPSat.postprocessing)

get_smoothness() (GPSat.models.gpytorch_models.GPyTorchGPRModel method) (GPSat.models.gpytorch_models.GPyTorchKISSGPModel method) get_transform_funcs() (GPSat.models.pure_python_gpr.PurePythonGPR method) get_weighted_values() (in module GPSat.utils), [1] get_where_list() (GPSat.dataloader.DataLoader static method), [1] get_where_list_legacy() (GPSat.dataloader.DataLoader static method), [1] global_select (GPSat.local_experts.LocalExpertData attribute) glue_local_predictions() (in module GPSat.postprocessing) (in module GPSat.utils), [1] glue_local_predictions_1d() (in module GPSat.postprocessing), [1] glue_local_predictions_2d() (in module GPSat.postprocessing), [1] GPflowGPRModel (class in GPSat.models.gpflow_models) GPflowSGPRModel (class in GPSat.models.gpflow_models) GPflowSVGPModel (class in GPSat.models.gpflow_models) GPflowVFFModel (class in GPSat.models.vff_model) GPR() (in module GPSat.models.pure_python_gpr) GPR_kron (class in GPSat.vff) GPSat module GPSat.bin_data module GPSat.dataloader module GPSat.dataprepper module GPSat.datetime_utils module GPSat.decorators module GPSat.local_experts module GPSat.models.base_model module GPSat.models.gpflow_models module GPSat.models.gpytorch_models module GPSat.models.pure_python_gpr module GPSat.models.sklearn_models module GPSat.models.vff_model module GPSat.plot_utils module GPSat.postprocessing module GPSat.prediction_locations module GPSat.read_and_store module GPSat.utils module, [1] GPSat.vff module GPyTorchGPRModel (class in GPSat.models.gpytorch_models) GPyTorchKISSGPModel (class in GPSat.models.gpytorch_models) grid_2d_flatten() (in module GPSat.utils), [1] guess_track_num() (in module GPSat.utils), [1]

H

hdf_tables_in_store() (GPSat.dataloader.DataLoader class method), [1]

I

inv() (GPSat.vff.BlockDiagMat method) (GPSat.vff.DiagMat method) (GPSat.vff.LowRankMat method) (GPSat.vff.Rank1Mat method) inv_diag() (GPSat.vff.BlockDiagMat method) (GPSat.vff.DiagMat method) (GPSat.vff.LowRankMat method) (GPSat.vff.Rank1Mat method)

inverse_sigmoid() (in module GPSat.utils), [1] inverse_softplus() (in module GPSat.utils), [1] is_list_of_dict() (GPSat.dataloader.DataLoader static method), [1]

J

json_load() (in module GPSat.utils), [1]

json_serializable() (in module GPSat.utils), [1]

K

kdt_tree_list_for_local_select() (GPSat.dataloader.DataLoader static method), [1]

kron() (in module GPSat.vff) kron_two() (in module GPSat.vff)

L

l_x (GPSat.postprocessing.SmoothingConfig attribute) l_y (GPSat.postprocessing.SmoothingConfig attribute) load() (GPSat.dataloader.DataLoader class method), [1] (GPSat.local_experts.LocalExpertData method) load_params() (GPSat.local_experts.LocalExpertOI method) local_data_select() (GPSat.dataloader.DataLoader class method), [1] local_select (GPSat.local_experts.LocalExpertData attribute) LocalExpertData (class in GPSat.local_experts)

LocalExpertOI (class in GPSat.local_experts), [1] log_lines() (in module GPSat.utils), [1] logdet() (GPSat.vff.BlockDiagMat method) (GPSat.vff.DiagMat method) (GPSat.vff.LowRankMat method) (GPSat.vff.Rank1Mat method) LowRankMat (class in GPSat.vff) LowRankMatNeg (class in GPSat.vff)

M

make_Kuf() (in module GPSat.vff) make_Kuf_np() (in module GPSat.vff) make_Kuu() (in module GPSat.vff) make_kvs() (in module GPSat.vff) make_kvs_np() (in module GPSat.vff) make_kvs_two() (in module GPSat.vff) make_kvs_two_np() (in module GPSat.vff) make_multiindex_df() (GPSat.dataloader.DataLoader static method), [1] match() (in module GPSat.utils), [1] matmul() (GPSat.vff.BlockDiagMat method) (GPSat.vff.DiagMat method) (GPSat.vff.LowRankMat method) (GPSat.vff.Rank1Mat method) matmul_sqrt() (GPSat.vff.BlockDiagMat method) (GPSat.vff.DiagMat method) (GPSat.vff.LowRankMat method) (GPSat.vff.Rank1Mat method) matmul_sqrt_transpose() (GPSat.vff.BlockDiagMat method) (GPSat.vff.DiagMat method) (GPSat.vff.LowRankMat method) (GPSat.vff.Rank1Mat method) max (GPSat.postprocessing.SmoothingConfig attribute) maximum_log_likelihood_objective() (GPSat.vff.GPR_kron method)

min (GPSat.postprocessing.SmoothingConfig attribute) mindex_df_to_mindex_dataarray() (GPSat.dataloader.DataLoader static method), [1] ModelConfig (class in GPSat.config_dataclasses) module GPSat GPSat.bin_data GPSat.dataloader GPSat.dataprepper GPSat.datetime_utils GPSat.decorators GPSat.local_experts GPSat.models.base_model GPSat.models.gpflow_models GPSat.models.gpytorch_models GPSat.models.pure_python_gpr GPSat.models.sklearn_models GPSat.models.vff_model GPSat.plot_utils GPSat.postprocessing GPSat.prediction_locations GPSat.read_and_store GPSat.utils, [1] GPSat.vff move_to_archive() (in module GPSat.utils), [1]

N

nested_dict_literal_eval() (in module GPSat.utils), [1] nll() (in module GPSat.utils), [1]

not_nan() (in module GPSat.utils), [1] Nystroem() (in module GPSat.models.pure_python_gpr)

O

obs_col (GPSat.local_experts.LocalExpertData attribute) optimise() (GPSat.models.pure_python_gpr.PurePythonGPR method) optimise_parameters() (GPSat.models.base_model.BaseGPRModel method) (GPSat.models.gpflow_models.GPflowGPRModel method) (GPSat.models.gpflow_models.GPflowSGPRModel method) (GPSat.models.gpflow_models.GPflowSVGPModel method) (GPSat.models.gpytorch_models.GPyTorchGPRModel method) (GPSat.models.pure_python_gpr.PurePythonGPR method) (GPSat.models.sklearn_models.sklearnGPRModel method)

P

pandas_to_dict() (in module GPSat.utils), [1] param_names (GPSat.models.base_model.BaseGPRModel property) (GPSat.models.gpflow_models.GPflowGPRModel property) (GPSat.models.gpflow_models.GPflowSGPRModel property) (GPSat.models.gpflow_models.GPflowSVGPModel property) (GPSat.models.gpytorch_models.GPyTorchGPRModel property) (GPSat.models.pure_python_gpr.PurePythonGPR property) (GPSat.models.sklearn_models.sklearnGPRModel property) pip_freeze_to_dataframe() (in module GPSat.utils), [1] plot_gpflow_minimal_example() (in module GPSat.plot_utils) plot_hist() (in module GPSat.plot_utils) plot_hist_from_results_data() (in module GPSat.plot_utils) plot_hyper_parameters() (in module GPSat.plot_utils) plot_locations_and_obs() (GPSat.local_experts.LocalExpertOI method) plot_pcolormesh() (in module GPSat.plot_utils)

plot_pcolormesh_from_results_data() (in module GPSat.plot_utils) plot_wrapper() (in module GPSat.bin_data) (in module GPSat.plot_utils) plot_xy() (in module GPSat.plot_utils) plot_xy_from_results_data() (in module GPSat.plot_utils) plots_from_config() (in module GPSat.plot_utils) predict() (GPSat.models.base_model.BaseGPRModel method) (GPSat.models.gpflow_models.GPflowGPRModel method) (GPSat.models.gpytorch_models.GPyTorchGPRModel method) (GPSat.models.pure_python_gpr.PurePythonGPR method) (GPSat.models.sklearn_models.sklearnGPRModel method) predict_f() (GPSat.vff.GPR_kron method) PredictionLocations (class in GPSat.prediction_locations) PredictionLocsConfig (class in GPSat.config_dataclasses) pretty_print_class() (in module GPSat.utils), [1] PurePythonGPR (class in GPSat.models.pure_python_gpr)

R

Rank1Mat (class in GPSat.vff) Rank1MatNeg (class in GPSat.vff) read_flat_files() (GPSat.dataloader.DataLoader class method), [1] read_from_multiple_files() (GPSat.dataloader.DataLoader class method), [1] read_from_npy() (GPSat.dataloader.DataLoader static method), [1] read_from_pkl_dict() (GPSat.dataloader.DataLoader static method), [1]

read_hdf() (GPSat.dataloader.DataLoader static method), [1] read_kwargs (GPSat.local_experts.LocalExpertData attribute) rmse() (in module GPSat.utils), [1] row_select (GPSat.local_experts.LocalExpertData attribute) row_select_bool() (GPSat.dataloader.DataLoader class method), [1] run() (GPSat.local_experts.LocalExpertOI method), [1] RunConfig (class in GPSat.config_dataclasses)

S

set_data() (GPSat.local_experts.LocalExpertOI method) set_data_source() (GPSat.local_experts.LocalExpertData method) set_expert_locations() (GPSat.local_experts.LocalExpertOI method) set_inducing_chol() (GPSat.models.gpflow_models.GPflowSVGPModel method) set_inducing_mean() (GPSat.models.gpflow_models.GPflowSVGPModel method) set_inducing_points() (GPSat.models.gpflow_models.GPflowSGPRModel method) (GPSat.models.gpflow_models.GPflowSVGPModel method) set_kernel_variance() (GPSat.models.gpflow_models.GPflowGPRModel method) (GPSat.models.gpytorch_models.GPyTorchGPRModel method) (GPSat.models.pure_python_gpr.PurePythonGPR method) (GPSat.models.sklearn_models.sklearnGPRModel method) (GPSat.models.vff_model.GPflowVFFModel method) set_kernel_variance_constraints() (GPSat.models.gpflow_models.GPflowGPRModel method) (GPSat.models.gpytorch_models.GPyTorchGPRModel method) (GPSat.models.pure_python_gpr.PurePythonGPR method) (GPSat.models.sklearn_models.sklearnGPRModel method) (GPSat.models.vff_model.GPflowVFFModel method) set_lengthscale_constraints() (GPSat.models.gpytorch_models.GPyTorchKISSGPModel method) set_lengthscales() (GPSat.models.gpflow_models.GPflowGPRModel method) (GPSat.models.gpytorch_models.GPyTorchGPRModel method) (GPSat.models.gpytorch_models.GPyTorchKISSGPModel method) (GPSat.models.pure_python_gpr.PurePythonGPR method) (GPSat.models.sklearn_models.sklearnGPRModel method) (GPSat.models.vff_model.GPflowVFFModel method) set_lengthscales_constraints() (GPSat.models.gpflow_models.GPflowGPRModel method) (GPSat.models.gpytorch_models.GPyTorchGPRModel method) (GPSat.models.pure_python_gpr.PurePythonGPR method) (GPSat.models.sklearn_models.sklearnGPRModel method) (GPSat.models.vff_model.GPflowVFFModel method) set_likelihood_variance() (GPSat.models.gpflow_models.GPflowGPRModel method) (GPSat.models.gpytorch_models.GPyTorchGPRModel method) (GPSat.models.pure_python_gpr.PurePythonGPR method) (GPSat.models.sklearn_models.sklearnGPRModel method)

set_likelihood_variance_constraints() (GPSat.models.gpflow_models.GPflowGPRModel method) (GPSat.models.gpytorch_models.GPyTorchGPRModel method) (GPSat.models.pure_python_gpr.PurePythonGPR method) set_model() (GPSat.local_experts.LocalExpertOI method) set_parameter_constraints() (GPSat.models.base_model.BaseGPRModel method) set_parameters() (GPSat.models.base_model.BaseGPRModel method) set_pred_loc() (GPSat.local_experts.LocalExpertOI method) set_smoothness() (GPSat.models.gpytorch_models.GPyTorchGPRModel method) (GPSat.models.gpytorch_models.GPyTorchKISSGPModel method) SGPkernel() (GPSat.models.pure_python_gpr.PurePythonGPR method) (in module GPSat.models.pure_python_gpr) shape (GPSat.vff.BlockDiagMat property) (GPSat.vff.DiagMat property) (GPSat.vff.LowRankMat property) (GPSat.vff.LowRankMatNeg property) (GPSat.vff.Rank1Mat property) (GPSat.vff.Rank1MatNeg property) sigmoid() (in module GPSat.utils), [1] sklearnGPRModel (class in GPSat.models.sklearn_models) SMLII() (GPSat.models.pure_python_gpr.PurePythonGPR method) SMLII_mod() (in module GPSat.models.pure_python_gpr) smooth_hyperparameters() (in module GPSat.postprocessing), [1] SmoothingConfig (class in GPSat.postprocessing), [1] softplus() (in module GPSat.utils), [1] solve() (GPSat.vff.BlockDiagMat method) (GPSat.vff.DiagMat method) (GPSat.vff.LowRankMat method) (GPSat.vff.Rank1Mat method) sparse_true_array() (in module GPSat.utils), [1] sqrt_dims (GPSat.vff.BlockDiagMat property) (GPSat.vff.DiagMat property) (GPSat.vff.LowRankMat property) (GPSat.vff.Rank1Mat property) stats_on_vals() (in module GPSat.utils), [1]

T

table (GPSat.local_experts.LocalExpertData attribute) timer() (in module GPSat.decorators) to_array() (in module GPSat.utils), [1] trace_KiX() (GPSat.vff.BlockDiagMat method) (GPSat.vff.DiagMat method) (GPSat.vff.LowRankMat method) (GPSat.vff.Rank1Mat method)

track_num_for_date() (in module GPSat.utils), [1]

U

update_attr() (in module GPSat.read_and_store)

update_obs_data() (GPSat.models.gpflow_models.GPflowGPRModel method)

W

WGS84toEASE2() (in module GPSat.utils), [1] WGS84toEASE2_New() (in module GPSat.utils), [1] where (GPSat.local_experts.LocalExpertData attribute)

write_dataframe_to_table() (GPSat.bin_data.BinData method) write_to_hdf() (GPSat.dataloader.DataLoader class method) write_to_netcdf() (GPSat.dataloader.DataLoader static method)